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# /home/peifer/diffit/def.h

Go to the documentation of this file.

    00001 #include<fstream>
    00002 #include<stdio.h>
    00003 #include<string>
    00004
    00005 using namespace std;
    00006
    00007
    00008 #ifndef TRUE
    00009 #define TRUE 1
    00010 #define FALSE 0
    00011 #endif
    00012
    00013 typedef struct
    00014 {
    00015   // experimental data
    00017   char *fileName;
    00019   long nobs;
    00024   long nvar;
    00025
    00026   // the actual data
    00028   long nMeasure;
    00033   double *xMeasure;
    00039   double **yMeasure;
    00044   double **sigma;
    00046   double fitstart, fitend;
    00048   long firstMeasure;
    00050   long lastMeasure;
    00051   // multiple shooting data
    00056   long nPoints;
    00061   double *mesh;
    00066   double **yTry,**yTrySave;
    00068   long me;
    00070   long mg;
    00071
    00072   // data obtained by integration
    00074   double objF;
    00079   double **yComp;
    00084   double **yPred;
    00090   double **h;
    00096   double **residues;
    00101   double *r2;
    00106   double *r3;
    00112   double ***dyds;
    00118   double ***dydp;
    00124   double ***dmds;
    00130   double ***dmdp;
    00136   double ***dR2ds;
    00142   double **dR2dp;
    00148   double ***dR3ds;
    00154   double **dR3dp;
    00159   double *ua,**Ea,**Pa;
    00164   double *ue,**Ee,**Pe;
    00169   double *ug,**Eg,**Pg;
    00174   double *y0;
    00180   double *par;
    00181   double **dS;
    00182   double *dP;
    00184   string *splineFile;
    00186   double **splineNodes;
    00188   double **splineY;
    00190   double **splineGam;
    00192   unsigned long *nNodes;
    00194   int splinesDefined;
    00195   double *errP;
    00196   double *errY0;
    00197 } GlobExp;
    00198
    00199 typedef struct
    00200 {
    00201   //flags
    00203   int noGnu;
    00204   int noMeasurements;
    00206   int wait;
    00208   int usesig;
    00210   int integrator;
    00211   int stiff;
    00213   int nowait;
    00215   int reg;
    00217   int simInit;
    00219   int nodamp;
    00220   //all the rest
    00222   long npar;
    00224   long maxit;
    00226   long nIter;
    00228   int nrExp;
    00237   int *doP;
    00242   double **covar;
    00244   double chisq;
    00246   double eps;
    00248   long rkqs_ign;
    00250   int maxstp;
    00252   double minimp;
    00257   double elastic;
    00258   double epsilon;
    00259   double lambda;
    00261   double dt;
    00263   double sig;
    00265   double pert;
    00273   int *y0fix;
    00274   //damping section
    00276   double wquer;
    00277
    00278   //GNUplot
    00280   FILE **gnuFp;
    00282   long ngnu;
    00284   long gnuindex;
    00288   long fitdim;
    00290   int initSpline;
    00292   int fitConverged;
    00296   double cond;
    00300   double Lambda;
    00303   int silent;
    00307   int strategy;
    00308
    00309   int minimiser;
    00310
    00311   int faktorLexist;
    00312   double *faktorL;
    00313 } Glob;
    00314
    00315 /* DEBUG stream */
    00316 extern ofstream *dbg;
    00317